STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) proteome

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
MENA_ECOLI
P32166
menA

yiiW

b3930 JW3901
1,4-dihydroxy-2-naphthoate octaprenyltransferase (DHNA-octaprenyltransferase) (EC 2.5.1.74)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted)
 
SRP
SEC
 
 
yes
yes
PLSC_ECOLI
P26647
plsC

parF

b3018 JW2986
1-acyl-sn-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (EC 2.3.1.51) (EC 2.3.1.n4) (Lysophosphatidic acid acyltransferase) (LPAAT) (Phosphatidic acid synthase) (PA synthase)
Integral Inner Membrane
B
Cell inner membrane | Peripheral membrane protein
Membrane anchored (Experimental)
IM (predicted)
 
 
SEC
 
 
yes
yes
YIAN_ECOLI
P37675
yiaN
b3578 JW5651
2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
no
yes
YIAM_ECOLI
P37674
yiaM
b3577 JW3549
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
no
yes
KDGT_ECOLI
P0A712
kdgT
b3909 JW5560
2-keto-3-deoxygluconate permease (KDG permease)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
yes
yes
KDTA_ECOLI
P0AC75
waaA

kdtA

b3633 JW3608
3-deoxy-D-manno-octulosonic-acid transferase (EC 2.4.-.-) (KDO transferase)
Integral Inner Membrane
B
Cell inner membrane | Single-pass membrane protein
Cytoplasmic
IM (predicted)
 
SRP
SEC
 
 
yes
yes
UBIA_ECOLI
P0AGK1
ubiA

cyr

b4040 JW4000
4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB polyprenyltransferase)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted)
 
SRP
SEC
 
 
yes
yes
YOJI_ECOLI
P33941
yojI

yojJ

b2211 JW2199
ABC transporter ATP-binding protein yojI
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
ACRB_ECOLI
P31224
acrB

acrE

b0462 JW0451
Acriflavine resistance protein B
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP (exp)
YidC
 
 
yes
yes
ACRF_ECOLI
P24181
acrF

envD

b3266 JW3234
Acriflavine resistance protein F (Protein envD)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
yes
yes
FADE_ECOLI
Q47146
fadE

yafH

b0221 JW5020
Acyl-coenzyme A dehydrogenase (ACDH) (EC 1.3.99.-)
Integral Inner Membrane
B
 
Integral Membrane Protein
IM (predicted)
 
SRP,TF
SEC
 
 
yes
yes
DCTA_ECOLI
P0A830
dctA
b3528 JW3496
Aerobic C4-dicarboxylate transport protein
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP
YidC
 
 
no
yes
ARCB_ECOLI
P0AEC3
arcB
b3210 JW5536
Aerobic respiration control sensor protein ArcB (EC 2.7.13.3)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
yes
yes
AER_ECOLI
P50466
aer

air yqjJ

b3072 JW3043
Aerotaxis receptor
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Membrane anchored
IM (predicted), Detected in IM Fraction
 
SRP
YidC
 
 
yes
yes
TQSA_ECOLI
P0AFS5
tqsA

ydgG

b1601 JW1593
AI-2 transport protein tqsA (Transport of quorum-sensing signal protein)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted)
 
SRP
SEC
 
 
no
yes
KGTP_ECOLI
P0AEX3
kgtP

witA

b2587 JW2571
Alpha-ketoglutarate permease
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein
IM (predicted), Detected in IM Fraction
 
SRP (exp)
SEC
 
 
no
yes
ABGT_ECOLI
P46133
abgT

ydaH

b1336 JW5822 ECK1332
Aminobenzoyl-glutamate transport protein
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted)
 
SRP
SEC
 
 
no
yes
AMTB_ECOLI
P69681
amtB

ybaG

b0451 JW0441
Ammonia channel (Ammonia transporter)
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
YidC
 
 
yes
yes
DCUA_ECOLI
P0ABN5
dcuA

genA

b4138 JW5735
Anaerobic C4-dicarboxylate transporter dcuA
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
yes
yes
DCUB_ECOLI
P0ABN9
dcuB

genF

b4123 JW4084
Anaerobic C4-dicarboxylate transporter dcuB
Integral Inner Membrane
B
Cell inner membrane | Multi-pass membrane protein
Integral Membrane Protein (Experimental)
IM (predicted), Detected in IM Fraction
 
SRP
SEC
 
 
no
yes
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