STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) proteome

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
CPDB_ECOLI
P08331
cpdB
b4213 JW4171
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase (EC 3.1.3.6) (EC 3.1.4.16)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
SurA
 
no
yes
YIAO_ECOLI
P37676
yiaO
b3579 JW3551
2,3-diketo-L-gulonate-binding periplasmic protein yiaO (2,3-DKG-binding protein) (Extracytoplasmic solute receptor protein yiaO)
Periplasmic
G
Secreted
Periplasmic
N/A
 
 
SEC
 
 
no
yes
HIUH_ECOLI
P76341
hiuH

yedX

b1970 JW1953
5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17) (Transthyretin-like protein) (TLP) (Transthyretin-related protein) (TRP)
Periplasmic
G
Secreted
Periplasmic
N/A
 
 
SEC
 
 
yes
yes
ARTJ_ECOLI
P30860
artJ
b0860 JW0844
ABC transporter arginine-binding protein 1
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
DsbA
 
yes
yes
YPHF_ECOLI
P77269
yphF
b2548 JW2532
ABC transporter periplasmic-binding protein yphF
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
YTFQ_ECOLI
P39325
ytfQ
b4227 JW4186
ABC transporter periplasmic-binding protein ytfQ
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
DsbA
 
yes
yes
ASR_ECOLI
P36560
asr
b1597 JW5826
Acid shock protein
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
TESA_ECOLI
P0ADA1
tesA

apeA pldC

b0494 JW0483
Acyl-CoA thioesterase I (EC 3.1.2.-) (Lecithinase B) (Lysophospholipase L1) (EC 3.1.1.5) (Protease I)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
PPB_ECOLI
P00634
phoA
b0383 JW0374
Alkaline phosphatase (APase) (EC 3.1.3.1)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
DsbA
 
no
yes
AMY1_ECOLI
P25718
malS
b3571 JW3543
Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
ASLA_ECOLI
P25549
aslA

atsA

b3801 JW3773
Arylsulfatase (AS) (EC 3.1.6.1) (Aryl-sulfate sulphohydrolase)
Periplasmic
G
Secreted
Periplasmic
N/A
 
 
SEC
 
 
no
yes
DGAL_ECOLI
P0AEE5
mglB
b2150 JW2137
Autoinducer 2 import ATP-binding protein lsrA (AI-2 import ATP-binding protein lsrA) (EC 3.6.3.-) (EGO10A)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
Skp
 
no
yes
LSRB_ECOLI
P76142
lsrB

yneA

b1516 JW1509
Autoinducer 2-binding protein lsrB (AI-2-binding protein lsrB)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
no
yes
BEPA_ECOLI
P66948
yfgC
b2494 JW2479
Beta-barrel assembly-enhancing protease
Periplasmic
G
 
Periplasmic
N/A
 
 
SEC
Skp
 
yes
yes
AMPC_ECOLI
P00811
ampC

ampA

b4150 JW4111
Beta-lactamase (EC 3.5.2.6) (Cephalosporinase)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
yes
yes
SPEA_ECOLI
P21170
speA
b2938 JW2905
Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
Periplasmic
G
Secreted
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
SEC, non classical
 
 
yes
yes
CUEO_ECOLI
P36649
cueO

yacK

b0123 JW0119
Blue copper oxidase cueO (Copper efflux oxidase)
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
TAT,SEC
 
 
yes
yes
CUSF_ECOLI
P77214
cusF

cusX ylcC

b0573 JW0562
Cation efflux system protein cusF
Periplasmic
G
Secreted
Periplasmic (Experimental)
N/A
 
 
SEC
 
 
yes
yes
CDH_ECOLI
P06282
cdh
b3918 JW3889
CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26) (CDP-diacylglycerol phosphatidylhydrolase) (CDP-diglyceride hydrolase)
Periplasmic
G
Cell inner membrane | Single-pass membrane protein
Membrane anchored
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
 
 
yes
yes
BCSC_ECOLI
P37650
bcsC

yhjL

b3530 JW5942
Cellulose synthase operon protein C
Periplasmic
G
 
Periplasmic
N/A
 
 
SEC
 
 
no
yes
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