STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) proteome

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(Uniprot)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
AG43_ECOLI
P39180
flu

yeeQ yzzX

b2000 JW1982
Antigen 43 (AG43) (Fluffing protein) [Cleaved into: Antigen 43 alpha chain; Antigen 43 beta chain]
Outer Membrane b-barrel protein
H
 
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
Autotransporter(T5S), TAM
no
no
OMPC_ECOLI
P06996
ompC

meoA par

b2215 JW2203
Bacteriophage N4 adsorption protein A
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
TF
SEC
Skp
BAM: β-Barrel Assembly Machinery
yes
yes
FIU_ECOLI
P75780
fiu

ybiL

b0805 JW0790
Catecholate siderophore receptor fiu (Ferric iron uptake protein) (TonB-dependent receptor fiu)
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
Skp
BAM: β-Barrel Assembly Machinery
yes
yes
CIRA_ECOLI
P17315
cirA

cir feuA

b2155 JW2142
Colicin I receptor
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
DSBA,SKP
BAM: β-Barrel Assembly Machinery
yes
yes
BGLH_ECOLI
P26218
bglH

yieC

b3720 JW3698
Cryptic outer membrane porin BglH
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
no
yes
FECA_ECOLI
P13036
fecA
b4291 JW4251
Fe(3+) dicitrate transport protein fecA (Iron(III) dicitrate transport protein fecA)
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
SURA,SKP
BAM: β-Barrel Assembly Machinery
no
yes
FEPA_ECOLI
P05825
fepA

fep feuB

b0584 JW5086
Ferrienterobactin receptor (Enterobactin outer-membrane receptor)
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
Skp
BAM: β-Barrel Assembly Machinery
yes
yes
FHUE_ECOLI
P16869
fhuE
b1102 JW1088
FhuE receptor (Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid)
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
no
yes
FADL_ECOLI
P10384
fadL

ttr

b2344 JW2341
Long-chain fatty acid transport protein (Outer membrane fadL protein) (Outer membrane flp protein)
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
SURA,SKP
BAM: β-Barrel Assembly Machinery
yes
yes
LPTD_ECOLI
P31554
lptD

imp ostA yabG

b0054 JW0053
LPS-assembly protein lptD (Organic solvent tolerance protein)
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
DSBA,DSBC,SURA,SKP
BAM: β-Barrel Assembly Machinery
yes
yes
LAMB_ECOLI
P02943
lamB

malB

b4036 JW3996
Maltoporin (Lambda receptor protein) (Maltose-inducible porin)
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
SKP,SURA,DEGP
BAM: β-Barrel Assembly Machinery
yes
yes
UIDC_ECOLI
Q47706
uidC

gusC

b1615 JW1607
Membrane-associated protein uidC
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
no
yes
MIPA_ECOLI
P0A908
mipA

yeaF

b1782 JW1771
MltA-interacting protein
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
yes
yes
TSX_ECOLI
P0A927
tsx

nupA

b0411 JW0401
Nucleoside-specific channel-forming protein tsx
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
yes
no
PHOE_ECOLI
P02932
phoE

ompE

b0241 JW0231
Outer membrane pore protein E
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
yes
yes
OMPP_ECOLI
P34210
ompP
 
Outer membrane protease ompP (EC 3.4.23.-)
Outer Membrane b-barrel protein
H
 
-
N/A
 
 
SEC
 
 
no
no
OMPA_ECOLI
P0A910
ompA

con tolG tut

b0957 JW0940
Outer membrane protein A (Outer membrane protein II*)
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
TF
SEC
SKP,SURA,DEGP,DSBA
BAM: β-Barrel Assembly Machinery
yes
yes
BAMA_ECOLI
P0A940
bamA

yaeT yzzN yzzY

b0177 JW0172
Outer membrane protein assembly factor yaeT (Omp85)
Outer Membrane b-barrel protein
H
Single-pass type I membrane protein
Outer Membrane ss-barrel protein(experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
SEC
 
BAM: β-Barrel Assembly Machinery
yes
yes
OMPF_ECOLI
P02931
ompF

cmlB coa cry tolF

b0929 JW0912
Outer membrane protein F (Outer membrane protein 1A) (Outer membrane protein B) (Outer membrane protein IA) (Porin OmpF)
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
TF
SEC
SKP,SURA
BAM: β-Barrel Assembly Machinery
yes
yes
OMPG_ECOLI
P76045
ompG
b1319 JW1312
Outer membrane protein G
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
Outer Membrane β-barrel protein (Experimental)
N/A
 
 
SEC
Skp
BAM: β-Barrel Assembly Machinery
no
yes
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