STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Sequences of Sec exported proteins in E.coli K-12 (MG1655)  Export to Excel  Export to CSV  

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Sequences of Sec exported proteins in E.coli K-12 (MG1655)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Full Name
ID
Uniprot
Export System
Prediction
Tool
Prediction
Score
Evidence of Signal Peptide
(Experimental/Predicted)
References
Signal Peptide /
Mature Domain
OMPP_ECOLI
P34210
ompP
Outer Membrane b-barrel protein
H
 
SEC
Phobius
 
experimental
MQTKLLAIML AAPVVFSSQE ASA

SDFFGPEKIS TEINLGTLSG KTKERVYEPE EGGRKVSQLD WKYSNAAILK GAVNWELNPW ... see all
 
 
ymgJ
Periplasmic
G
 
 
 
 
 
 
 
YJBT_ECOLI
A5A628
yjbT
Periplasmic
G
 
SEC
Phobius/SignalP4.1
 
Predicted
 
MKRNLIKVVK MKPYFAALML SVSVLPAYA

GPLGTADKAD LPQSNVSSPM MAQSLRQPDL QPISTDRKTE CFRLYTPDRK PGVNCVPDGS ... see all
 
 
rzoQ
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
 
 
 
 
 
 
YPDI_ECOLI
O32528
ypdI
Outer Membrane Lipoprotein
I
Cell membrane | Lipid-anchor
SEC
LipoP
00.415
Predicted
 
MKVNLILFSL FLLVSIMA

CNVFAFSISG GGSERSYKET EKTSAMTTTH STKLQPSQAI LFKMREDAPP LNLTEEMPPP ... see all
YFJS_ECOLI
O52982
yfjS
Inner Membrane Lipoprotein
E
Cell membrane | Lipid-anchor
SEC
LipoP
18.723
Predicted
 
MKRKTLPLLA LVATSLFLSA

CDDRSDDLKA ISKFKDLTPP RFSDVVSRQD DVSEEWSQVG FSSGLTLQVL RTRESPDGCE ... see all
PPB_ECOLI
P00634
phoA
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.408
Experimental
MKQSTIALAL LPLLFTPVTK A

RTPEMPVLEN RAAQGDITAP GGARRLTGDQ TAALRDSLSD KPAKNIILLI GDGMGDSEIT ... see all
ASPG2_ECOLI
P00805
ansB
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
experimental
MEFFKKTALA ALVMGFSGAA LA

LPNITILATG GTIAGGGDSA TKSNYTVGKV GVENLVNAVP QLKDIANVKG EQVVNIGSQD ... see all
AMPC_ECOLI
P00811
ampC
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.854
Experimental
MFKTTLCALL ITASCSTFA

APQQINDIVH RTITPLIEQQ KIPGMAVAVI YQGKPYYFTW GYADIAKKQP VTQQTLFELG ... see all
ARAF_ECOLI
P02924
araF
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Experimental
MHKFTKALAA IGLAAVMSQS AMA

ENLKLGFLVK QPEEPWFQTE WKFADKAGKD LGFEVIKIAV PDGEKTLNAI DSLAASGAKG ... see all
RBSB_ECOLI
P02925
rbsB
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.839
Experimental
MNMKKLATLV SAVALSATVS ANAMA

KDTIALVVST LNNPFFVSLK DGAQKEADKL GYNLVVLDSQ NNPAKELANV QDLTVRGTKI ... see all
TOLC_ECOLI
P02930
tolC
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP4
00.712
Experimental
MKKLLPILIG LSLSGFSSLS QA

ENLMQVYQQA RLSNPELRKS AADRDAAFEK INEARSPLLP QLGLGADYTY SNGYRDANGI ... see all
OMPF_ECOLI
P02931
ompF
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP4
00.883
Experimental
MMKRNILAVI VPALLVAGTA NA

AEIYNKDGNK VDLYGKAVGL HYFSKGNGEN SYGGNGDMTY ARLGFKGETQ INSDLTGYGQ ... see all
PHOE_ECOLI
P02932
phoE
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP4
00.841
Experimental
MKKSTLALVV MGIVASASVQ A

AEIYNKDGNK LDVYGKVKAM HYMSDNASKD GDQSYIRFGF KGETQINDQL TGYGRWEAEF ... see all
LAMB_ECOLI
P02943
lamB
Outer Membrane b-barrel protein
H
Cell outer membrane | Multi-pass membrane protein
SEC
SignalP4
00.795
Experimental
MMITLRKLPL AVAVAAGVMS AQAMA

VDFHGYARSG IGWTGSGGEQ QCFQTTGAQS KYRLGNECET YAELKLGQEV WKEGDKSFYF ... see all
MALM_ECOLI
P03841
malM
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.606
Experimental
MKMNKSLIVL CLSAGLLASA PGISLA

DVNYVPQNTS DAPAIPSAAL QQLTWTPVDQ SKTQTTQLAT GGQQLNVPGI SGPVAAYSVP ... see all
FIMA1_ECOLI
P04128
fimA
Peripheral outer membrane protein facing the extra-cellular space
F4
Fimbrium
SEC
SignalP4.1
00.780
Predicted
 
MKIKTLAIVV LSALSLSSTA ALA

AATTVNGGTV HFKGEVVNAA CAVDAGSVDQ TVQLGQVRTA SLAQEGATSS AVGFNIQLND ... see all
LIVK_ECOLI
P04816
livK
Periplasmic
G
Periplasm
SEC
SignalP4.1
00.817
Experimental
MKRNAKTIIA GMIALAISHT AMA

DDIKVAVVGA MSGPIAQWGD MEFNGARQAI KDINAKGGIK GDKLVGVEYD DACDPKQAVA ... see all
NLPA_ECOLI
P04846
nlpA
Inner Membrane Lipoprotein
E
Cell inner membrane | Lipid-anchor
SEC
LipoP
21.798
Experimental
MKLTTHHLRT GAALLLAGIL LAG

CDQSSSDAKH IKVGVINGAE QDVAEVAKKV AKEKYGLDVE LVGFSGSLLP NDATNHGELD ... see all
PTRA_ECOLI
P05458
ptrA
Periplasmic
G
Periplasm
SEC
SignalP4.1
01.000
Predicted
 
MPRSTWFKAL LLLVALWAPL SQA

ETGWQPIQET IRKSDKDNRQ YQAIRLDNGM VVLLVSDPQA VKSLSALVVP VGSLEDPEAY ... see all
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